The Chilean scallop Argopecten purpuratus (Lamarck, ) is a ‘bay scallop’ found in shallow bays from Paita, Peru (5°S, 81°W) to Valparaiso. PDF | Daily striae on the shell of the scallop, Argopecten purpuratus, were used to investigate its growth in a protected population within La. Gigascience. Apr 1;7(4). doi: /gigascience/giy Draft genome of the Peruvian scallop Argopecten purpuratus. Li C(1), Liu X(2), Liu B(1), Ma B(3).
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Related articles in Web of Science Google Scholar. Protein-coding genes from the Peruvian scallop and other sequenced species, including Brachiopod Lingula anatinabrown mussel Modiolus philippinarumCalifornia sea hare Aplysia californicacold seep mussel Bathymodiolus platifronsFlorida lancelet B.
The raw reads were trimmed before being used for subsequent genome assembly. Supporting data are available in the GigaScience database [ 52 ].
WoRMS – World Register of Marine Species – Argopecten purpuratus (Lamarck, )
How was it caught or farmed? A total of Qingdao Oceanwide BioTech Co. First, in order to solve the issue of heterozygosity, in our assembly process we chose kmer to draw k-mer distribution histogram and classified all the kmers into homozygous kmer and heterozygous kmer according to the coverage depth. List of fishing topics by subject.
Argopecten purpuratus – Wikipedia
Bootstrap support of phylogenetic tree. The transcriptome data were generated from adductor muscle, hepatopancreas, and mantle on Illumina HiSeq platform.
The current genome data purpkratus also facilitate genetic analyses of the evolutionary history of the purpuratud scallops in the world. Only one peak was observed in the sequencing depth distribution analysis with the argopecfen sequencing depth of Unlike other Argopecten scallops, the Peruvian scallop normally has a long life span of up to 7 to 10 years.
Finally, among these annotated genes, Draft genome of the Peruvian scallop Argopecten purpuratus Chao Li. A whole genome shotgun sequencing strategy was then applied. Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomes.
Peruvian scallops, Scallop, Peru scallop. Homology sequences from African malaria mosquito Anopheles gambiaeascidian Ciona intestinalisFlorida lancelet Branchiostoma floridaefruit fly Drosophila purpiratushuman Homo sapiensleech Helobdella robustanematode Caenorhabditis elegansoctopus Octopus bimaculoidesowl limpet Lottia giganteaArgopectenn oyster Crassostrea gigasand sea urchin Strongylocentrotus purpuratus were downloaded from Ensemble [ 21 ].
The Peruvian scallop Argopecten purpuratusalso known as the Chilean scallop, is a medium-sized bivalve with a wide distribution in Peru and Chile [ 1 ]. In Chile, the cultured scallops reach a commercial size of around 9 cm in shell height within 14—16 months [ 2 purpurahus.
Therefore, researchers have been using it to develop hybrid vigor. Articles with ‘species’ microformats All stub articles. Chiton magnificus Acanthopleura echinata Acanthopleura granulata. Sign In or Create an Account. Finally, we estimated that the divergence between the Peruvian scallop and Yesso scallop happened at The total number of bootstrap was In addition, SMRTbell libraries were prepared using either kb or kb preparation protocols.
Clade support was assessed using bootstrapping algorithm in the RAxML package with alignment replicates Fig.
Draft genome of the Peruvian scallop Argopecten purpuratus.
It is a relatively stenothermic species as afgopecten natural habitat is largely under the influence of upwelling currents from Antarctica [ 3 ]. Related topics Oyster farming Land snail farming Gastropod anatomy Bivalve anatomy.
From Wikipedia, the free encyclopedia. After assembly, the reads from short insert length libraries were mapped onto the assembled genome. The de novo prediction of genes was carried out with four programs: